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STR Loci, Multiplexes, and DNA•VIEW

The numbers [in brackets] are the internal line or code number within DNA•VIEW. DNA•VIEW users are recommended to use the official numbers consistently. Consistency in numbering is essential for importing databases, for sharing databases with other users, and facilitates collaborative projects. A complete list (to date) of locus numbers is below.
Dye colors
BlueFAM
GreenJOEVIC
YellowTMRNED
RedROXPET
OrangeLIZ
ABI multiplexes
Profiler Profiler+ Cofiler Identifiler SGM+ TGM
Blue
D3S1358 [127]
VWA [70]
FGA [14]
D3S1358 [127]
D16S539 [138]
D8S1179 [139]
D21S11 [99]
D7S820 [130]
CSF1PO [84]
D3S1358 [127]
VWA [70]
D16S539 [138]
D2S1338 [147]
Green I
Amelogenin [90]
THO1 [69]
TPOX [85]
CSF1PO [84]
Green II
Amelogenin [90]
D8S1179 [139]
D21S11 [99]
D18S51 [42]
Green I D3S1358 [127]
THO1 [69]
D13S317 [129]
D16S539 [138]
D2S1338 [147]
Green II
Yellow
D5S818 [128]
D13S317 [129]
D7S820 [130]
D7S820 [130]
D19S433 [148]
VWA [70]
TPOX [85]
D18S51 [42]
D19S433 [148]
THO1 [69]
FGA [14]
CODIS loci
(Cofiler plus Profiler+)
Amelogenin [90]
D5S818 [128]
FGA [14]
D22S684 [159]
D10S516 [160]
D14S306 [161]
D1S518 [162]
Promega multiplexes
PowerPlex 1 PowerPlex 2.1 PowerPlex 16
D16S539 [138]
D7S820 [130]
D13S317 [129]
D5S818 [128]
Penta E [154]
D18S51 [42]
D21S11 [99]
THO1 [69]
D3S1358 [127]
D3S1358 [127]
THO1 [69]
D21S11 [99]
D18S51 [42]
Penta E [154]
CODIS loci D5S818 [128]
D13S317 [129]
D7S820 [130]
D16S539 [138]
CSF1PO [84]
Penta D [153]
CSF1PO [84]
TPOX [85]
THO1 [69]
VWA [70]
FGA [14]
TPOX [85]
D8S1179 [139]
VWA [70]
Amelogenin [90]
VWA [70]
D8S1179 [139]
TPOX [85]
FGA [14]
Polymarkers
DQA1 [41]
LDLR [121]
GYPA [123]
HBGG [120]
D7S8 [122]
Gc [124]
Lifecodes
D12S1090 [142]
D18S849 [143]
D3S1744 [137]
Yamamoto Mini6
D20S480 [413]
D6S2439 [414]
D6S1056 [415]
D9S1118 [416]
D4S2639 [417]
D17S1290 [418]
Other loci
D1S80 [32]
Se33 [68]
FES/FPS [72]
F13A [71]
F13B [86]
ApoB [30]
HPRTB [89]
FFFL
F13A [71]
FES/FPS [72]
F13B [86]
LPL [88]

PCR locus numbers in DNA•VIEW

D1
D1S80 [32]
F13B [86]
D1S111 [125]
D1S533 [145]
D1S518 [162]
D1S1656 [196]

D2
ApoB [30]
TPOX [85]
D2S1338 [147]
D2S1371 [401]
D2S1360 [407]

D3
L892 [64]
D3S1358 [127]
D3S1744 [137]
D3S1545 [198]
D3S2406 [400]

D4
FGA [14]
GABRB1 [97]
GYPA [123]
Gc [124]
D4S2368 [406]
D4S2366 [412]
D4S2639 [417]

D5
CSF1PO [84]
D5S818 [128]
D5S2500 [409]

D6
DQAI [41]
SE33 [68]
F13A1 [71]
DHFRP2 [134]
DRB1 [149]
Penta F [155]
HLADRB [195]
D6S1043 [403]
D6S474 [408]
D6S2439 [414]
D6S1056 [415]

D7
D7S8 [122]
D7S820 [130]
IL-6 [131]
Penta B [151]
D7S1517 [197]
D7S821 [405]

D8
LPL [88]
D8S306 [132]
D8S639 [133]
D8S1179 [139]
Penta A [150]
D8S320 [163]
D8S1132 [193]
D8S1477 [402]

D9
D9S304 [144]
Penta C [152]
D9S925 [404]
D9S1118 [416]

D10
D10S516 [160]
D10S2325 [411]

D11
HRAS1 [39]
THO1 [69]
HBGG [120]
D11S554 [136]
D11S488 [164]

D12
PLA2A1 [10]
D12S391 [16]
VWA [70]
COL2A1 [83]
CD4 [96]
D12S1090 [142]

D13
D13S317 [129]

D14
D14S306 [161]
D14S118 [165]
D14S543 [166]

D15
FES/FPS [72]
CYAR04 [94]
Penta E [154]
CYP19 [194]

D16
D16S83 [12]
D16S539 [138]

D17
D17S5 [9]
D17S766 [146]
D17S1290 [418]

D18
D18S51 [42]
D18S849 [143]

D19
D19S253 [76]
LDLR [121]
MYD [140]
D19S433 [148]

D20
D20S161 [92]
D20S470 [135]
D20S156 [199]
D20S480 [413]

D21
D21S11 [99]
Penta D [153]
D21S2055 [410]

D22
Penta G [156]
D22S684 [159]

DX
DXS52 [18]
HPRTB [89]
Amelognn [90]
LEX3 [215]
DXS101 [250]
DXS10011 [251]
DXS8378 [252]
DXS9895 [253]
DXS9898 [254]
DXS8377 [255]
DXS7424 [256]
DXS10135 [258]
DXS10101 [259]
DXS7132 [260]
DXS10074 [261]
DXS10134 [262]
DXS7423 [263]
DXS6800 [264]

DY
DYS464 [230]
DYS446 [231]
DYS463 [232]
DYS458 [233]
DYS456 [234]
DYS452 [235]
DYS449 [236]
DYS385b [237]
DYCAIIb [238]
GATA172D05 [257]
DYS19 [167]
DYS389I [168]
DYS389II [169]
DYS390 [170]
DYS391 [171]
DYS392 [172]
DYS393 [173]
DYS385 [174]
DYCAII [175]
DYS437 [176]
DYS438 [177]
DYS439 [178]
DYS388 [179]
DYS434 [180]
DYS435 [181]
DYS436 [182]
DY-A4 [183]
DYS460 [184]
DY-A7.2 [185]
DY-A8 [186]
DY-A10 [187]
DY-C4 [188]
DY-H4 [189]
DYS426 [190]
DYS447 [191]
DYS448 [192]

various SNP's
[300-399]
[441-491] European Consortium SNPs
rs1005533[441]
rs1015250[442]
rs1024116[443]
rs1029047[444]
rs1031825[445]
rs10495407[446]
rs1335873[447]
rs1355366[448]
rs1357617[449]
rs1360288[450]
rs1382387[451]
rs1413212[452]
rs1454361[453]
rs1463729[454]
rs1490413[455]
rs1493232[456]
rs1528460[457]
rs1886510[458]
rs1979255[459]
rs2040411[460]
rs2046361[461]
rs2056277[462]
rs2076848[463]
rs2107612[464]
rs2111980[465]
rs251934[466]
rs2831700[467]
rs354439[468]
rs717302[469]
rs719366[470]
rs722098[471]
rs727811[472]
rs729172[473]
rs733164[474]
rs735155[475]
rs737681[476]
rs740910[477]
rs763869[478]
rs8037429[479]
rs873196[480]
rs876724[481]
rs891700[482]
rs901398[483]
rs907100[484]
rs914165[485]
rs917118[486]
rs938283[487]
rs964681[488]
rs2016276[489]
rs826472[490]
rs2830795[491]
rs1028528[492]

site use
[100-119]

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